Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Mir1894-201ENSMUST00000122802 81 ntBASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Shroom2A2ALU4 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Grk6-207ENSMUST00000225925 2769 ntBASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Shroom2A2ALU4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Shroom2A2ALU4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 AA619741-201ENSMUST00000195095 646 ntBASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Shroom2A2ALU4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Gm27243-201ENSMUST00000183964 521 ntBASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Gm8839-201ENSMUST00000121279 1645 ntBASIC24.09■■□□□ 1.45
Shroom2A2ALU4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
Shroom2A2ALU4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC24.08■■□□□ 1.45
Shroom2A2ALU4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Shroom2A2ALU4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC24.08■■□□□ 1.45
Shroom2A2ALU4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC24.08■■□□□ 1.45
Shroom2A2ALU4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC24.08■■□□□ 1.45
Shroom2A2ALU4 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC24.08■■□□□ 1.45
Shroom2A2ALU4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Haglr-201ENSMUST00000100000 2085 ntBASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Shroom2A2ALU4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Shroom2A2ALU4 Gm12176-201ENSMUST00000121420 875 ntBASIC24.07■■□□□ 1.44
Shroom2A2ALU4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Shroom2A2ALU4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Shroom2A2ALU4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC24.07■■□□□ 1.44
Shroom2A2ALU4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms