Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IsxA1A546 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IsxA1A546 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
IsxA1A546 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
IsxA1A546 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
IsxA1A546 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.45□□□□□ -0.1
IsxA1A546 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
IsxA1A546 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
IsxA1A546 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
IsxA1A546 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.44□□□□□ -0.1
IsxA1A546 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
IsxA1A546 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
IsxA1A546 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
IsxA1A546 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
IsxA1A546 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.44□□□□□ -0.1
IsxA1A546 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IsxA1A546 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
IsxA1A546 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IsxA1A546 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IsxA1A546 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.43□□□□□ -0.1
IsxA1A546 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.43□□□□□ -0.1
IsxA1A546 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.43□□□□□ -0.1
IsxA1A546 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.43□□□□□ -0.1
IsxA1A546 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
IsxA1A546 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
IsxA1A546 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
IsxA1A546 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
IsxA1A546 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
IsxA1A546 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.42□□□□□ -0.1
IsxA1A546 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
IsxA1A546 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
IsxA1A546 Gm15565-201ENSMUST00000118890 427 ntBASIC14.42□□□□□ -0.1
IsxA1A546 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
IsxA1A546 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
IsxA1A546 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.41□□□□□ -0.1
IsxA1A546 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.41□□□□□ -0.1
IsxA1A546 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
IsxA1A546 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.41□□□□□ -0.1
IsxA1A546 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms