Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav12-1A0N8R1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Mir6982-201ENSMUST00000184354 68 ntBASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav12-1A0N8R1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm15794-201ENSMUST00000120182 631 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm8825-201ENSMUST00000182565 998 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm4518-201ENSMUST00000182638 718 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav12-1A0N8R1 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms