Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Gm18622-201ENSMUST00000219361 595 ntBASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Gm10175-201ENSMUST00000086013 645 ntBASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Prob1-201ENSMUST00000097619 3021 ntBASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cfap99A0A140LIX9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Gm25911-201ENSMUST00000157621 56 ntBASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cfap99A0A140LIX9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cfap99A0A140LIX9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.47■□□□□ 0.55
Cfap99A0A140LIX9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.46■□□□□ 0.55
Cfap99A0A140LIX9 Gm8825-201ENSMUST00000182565 998 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms