Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-2A0A0G2JDP3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm25745-201ENSMUST00000174945 133 ntBASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm4609-201ENSMUST00000106443 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm5138-201ENSMUST00000113842 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm15191-201ENSMUST00000117933 1000 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm12182-201ENSMUST00000118655 1008 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm13882-201ENSMUST00000120886 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm10284-201ENSMUST00000145057 1005 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm10481-201ENSMUST00000179228 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm2574-201ENSMUST00000181051 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm3200-201ENSMUST00000181493 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm8825-201ENSMUST00000182565 998 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm4518-201ENSMUST00000182638 718 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm8330-201ENSMUST00000182754 1008 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm4575-201ENSMUST00000182991 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm8709-201ENSMUST00000183230 1012 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm17807-201ENSMUST00000186869 298 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm10293-201ENSMUST00000076317 1002 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gm6316-201ENSMUST00000082064 1020 ntBASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trav9n-2A0A0G2JDP3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms