Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm25016-201ENSMUST00000158399 131 ntBASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 AC114585.2-202ENSMUST00000228094 426 ntBASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Ighv1-11A0A0A6YWI9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms