Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gm10676-201ENSMUST00000098778 3221 ntBASIC10.71□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Mir1668-201ENSMUST00000184114 107 ntBASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm37055-201ENSMUST00000191866 133 ntBASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC10.69□□□□□ -0.7
Trav13-4-dv7A0A075B6C2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms