Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav6-5A0A075B6B5 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav6-5A0A075B6B5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Gm18284-201ENSMUST00000172604 624 ntBASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Gm37297-201ENSMUST00000192974 2384 ntBASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav6-5A0A075B6B5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Gm20049-201ENSMUST00000219950 730 ntBASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav6-5A0A075B6B5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav6-5A0A075B6B5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms