Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Mir5130-201ENSMUST00000175160 84 ntBASIC12.33□□□□□ -0.44
Trav17A0A075B655 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav17A0A075B655 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.32□□□□□ -0.44
Trav17A0A075B655 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm13436-201ENSMUST00000120418 567 ntBASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm37722-201ENSMUST00000193757 208 ntBASIC12.32□□□□□ -0.44
Trav17A0A075B655 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav17A0A075B655 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.32□□□□□ -0.44
Trav17A0A075B655 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav17A0A075B655 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.31□□□□□ -0.44
Trav17A0A075B655 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.31□□□□□ -0.44
Trav17A0A075B655 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.31□□□□□ -0.44
Trav17A0A075B655 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trav17A0A075B655 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms