Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm7889-201ENSMUST00000185591 958 ntBASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms