Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav16d-dv11A0A075B617 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm44450-201ENSMUST00000199528 114 ntBASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav16d-dv11A0A075B617 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav16d-dv11A0A075B617 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav16d-dv11A0A075B617 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms