Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.76□□□□□ -0.37
Pfdn5Q9WU28 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Gm12441-201ENSMUST00000121806 588 ntBASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn5Q9WU28 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn5Q9WU28 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms