Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Sybu-209ENSMUST00000228639 4113 ntBASIC15.15■□□□□ 0.02
Cdh17Q9R100 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdh17Q9R100 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdh17Q9R100 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.13■□□□□ 0.01
Cdh17Q9R100 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdh17Q9R100 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Gm14722-201ENSMUST00000118943 689 ntBASIC15.12■□□□□ 0.01
Cdh17Q9R100 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.12■□□□□ 0.01
Cdh17Q9R100 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdh17Q9R100 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms