Protein–RNA interactions for Protein: Q9R078

Prkab1, 5'-AMP-activated protein kinase subunit beta-1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prkab1Q9R078 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.7■□□□□ 0.42
Prkab1Q9R078 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Prkab1Q9R078 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Prkab1Q9R078 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.69■□□□□ 0.42
Prkab1Q9R078 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Prkab1Q9R078 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Mir1895-201ENSMUST00000122615 79 ntBASIC17.68■□□□□ 0.42
Prkab1Q9R078 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.68■□□□□ 0.42
Prkab1Q9R078 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.68■□□□□ 0.42
Prkab1Q9R078 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Prkab1Q9R078 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
Prkab1Q9R078 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Gm12008-201ENSMUST00000117791 755 ntBASIC17.67■□□□□ 0.42
Prkab1Q9R078 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.67■□□□□ 0.42
Prkab1Q9R078 Gm20553-201ENSMUST00000204205 844 ntBASIC17.67■□□□□ 0.42
Prkab1Q9R078 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Gm45612-201ENSMUST00000211320 160 ntBASIC17.67■□□□□ 0.42
Prkab1Q9R078 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.67■□□□□ 0.42
Prkab1Q9R078 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Prkab1Q9R078 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.66■□□□□ 0.42
Prkab1Q9R078 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Gm9385-201ENSMUST00000117563 472 ntBASIC17.66■□□□□ 0.42
Prkab1Q9R078 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Gm13365-201ENSMUST00000121188 973 ntBASIC17.66■□□□□ 0.42
Prkab1Q9R078 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Prkab1Q9R078 Gm8396-201ENSMUST00000057361 823 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms