Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nubp1Q9R060 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm27646-201ENSMUST00000183989 110 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm38216-201ENSMUST00000194872 1214 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm45612-201ENSMUST00000211320 160 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm18622-201ENSMUST00000219361 595 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Dancr-204ENSMUST00000132389 2347 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.62□□□□□ -0.23
Nubp1Q9R060 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nubp1Q9R060 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Gm5682-201ENSMUST00000173402 505 ntBASIC13.61□□□□□ -0.23
Nubp1Q9R060 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.61□□□□□ -0.23
Nubp1Q9R060 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Gm7787-201ENSMUST00000216858 688 ntBASIC13.61□□□□□ -0.23
Nubp1Q9R060 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nubp1Q9R060 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.6□□□□□ -0.23
Nubp1Q9R060 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nubp1Q9R060 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms