Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Gm27389-201ENSMUST00000183622 195 ntBASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Gm37055-201ENSMUST00000191866 133 ntBASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Lsm4Q9QXA5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Gm22240-201ENSMUST00000175225 82 ntBASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Gm21559-201ENSMUST00000220638 855 ntBASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Gm8587-201ENSMUST00000076538 843 ntBASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lsm4Q9QXA5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lsm4Q9QXA5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.24□□□□□ -0.45
Lsm4Q9QXA5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms