Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm11424-201ENSMUST00000121929 829 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm2451-201ENSMUST00000199447 999 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm10290-201ENSMUST00000200451 999 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm14719-201ENSMUST00000121891 340 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm27306-201ENSMUST00000183970 107 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.46■□□□□ 0.39
Cacna1fQ9JIS7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.46■□□□□ 0.38
Cacna1fQ9JIS7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Cacna1fQ9JIS7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Gm2423-201ENSMUST00000074863 733 ntBASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Cacna1fQ9JIS7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Gm25144-201ENSMUST00000179561 110 ntBASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Gm25352-201ENSMUST00000179815 110 ntBASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Gm27430-201ENSMUST00000184585 107 ntBASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Gm44333-201ENSMUST00000197168 107 ntBASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cacna1fQ9JIS7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cacna1fQ9JIS7 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Mir6977-201ENSMUST00000184960 64 ntBASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Gm29310-201ENSMUST00000185468 696 ntBASIC17.42■□□□□ 0.38
Cacna1fQ9JIS7 Gm21825-201ENSMUST00000185728 696 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms