Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.51□□□□□ -0.41
Smco4Q9JIS3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Gm43017-201ENSMUST00000198296 752 ntBASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smco4Q9JIS3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Zfp783-201ENSMUST00000095946 670 ntBASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Smco4Q9JIS3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smco4Q9JIS3 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms