Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfrsf13bQ9ET35 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Gm27389-201ENSMUST00000183622 195 ntBASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfrsf13bQ9ET35 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Gm18959-201ENSMUST00000208954 655 ntBASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf13bQ9ET35 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf13bQ9ET35 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Gm9987-201ENSMUST00000069768 567 ntBASIC12.2□□□□□ -0.46
Tnfrsf13bQ9ET35 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms