Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Gm43347-201ENSMUST00000200226 580 ntBASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Gm7461-201ENSMUST00000058918 827 ntBASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a3bpQ9EQG9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Col4a3bpQ9EQG9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Gm15165-201ENSMUST00000118140 502 ntBASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Gm12644-201ENSMUST00000119935 606 ntBASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Gm27867-201ENSMUST00000184778 125 ntBASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col4a3bpQ9EQG9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Col4a3bpQ9EQG9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col4a3bpQ9EQG9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.75■□□□□ 0.43
Col4a3bpQ9EQG9 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms