Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Gm27839-201ENSMUST00000184242 106 ntBASIC17.47■□□□□ 0.39
Upf1Q9EPU0 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Upf1Q9EPU0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Gm15678-201ENSMUST00000117573 960 ntBASIC17.46■□□□□ 0.39
Upf1Q9EPU0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Gm18753-201ENSMUST00000201000 566 ntBASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Upf1Q9EPU0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Upf1Q9EPU0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
Upf1Q9EPU0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Gm14660-201ENSMUST00000119809 575 ntBASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upf1Q9EPU0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Gm16476-201ENSMUST00000221544 139 ntBASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.44■□□□□ 0.38
Upf1Q9EPU0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Mir5132-201ENSMUST00000175166 71 ntBASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Gm6244-201ENSMUST00000178732 841 ntBASIC17.43■□□□□ 0.38
Upf1Q9EPU0 Gm17794-201ENSMUST00000220252 955 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms