Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
U2af1Q9D883 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
U2af1Q9D883 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.38■□□□□ 0.85
U2af1Q9D883 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
U2af1Q9D883 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.38■□□□□ 0.85
U2af1Q9D883 AC131709.1-201ENSMUST00000224731 1180 ntBASIC20.38■□□□□ 0.85
U2af1Q9D883 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
U2af1Q9D883 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
U2af1Q9D883 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
U2af1Q9D883 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.38■□□□□ 0.85
U2af1Q9D883 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.37■□□□□ 0.85
U2af1Q9D883 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Gm11779-201ENSMUST00000118541 368 ntBASIC20.37■□□□□ 0.85
U2af1Q9D883 Gm14722-201ENSMUST00000118943 689 ntBASIC20.37■□□□□ 0.85
U2af1Q9D883 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.37■□□□□ 0.85
U2af1Q9D883 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
U2af1Q9D883 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.37■□□□□ 0.85
U2af1Q9D883 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Gm7787-201ENSMUST00000216858 688 ntBASIC20.37■□□□□ 0.85
U2af1Q9D883 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
U2af1Q9D883 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
U2af1Q9D883 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1Q9D883 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1Q9D883 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1Q9D883 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm11873-201ENSMUST00000117877 1304 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1Q9D883 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1Q9D883 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm12260-201ENSMUST00000122447 411 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm27300-201ENSMUST00000184085 97 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm27335-201ENSMUST00000184758 97 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.36■□□□□ 0.85
U2af1Q9D883 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
U2af1Q9D883 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.36■□□□□ 0.85
U2af1Q9D883 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
U2af1Q9D883 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
U2af1Q9D883 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.34■□□□□ 0.85
U2af1Q9D883 Gm9727-201ENSMUST00000161387 555 ntBASIC20.34■□□□□ 0.85
U2af1Q9D883 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
U2af1Q9D883 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.34■□□□□ 0.85
U2af1Q9D883 Gm8318-201ENSMUST00000182954 872 ntBASIC20.34■□□□□ 0.85
U2af1Q9D883 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.34■□□□□ 0.85
U2af1Q9D883 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms