Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Chmp5Q9D7S9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Gm15565-201ENSMUST00000118890 427 ntBASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.42■□□□□ 0.7
Chmp5Q9D7S9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Efs-202ENSMUST00000227037 2540 ntBASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Gm18032-201ENSMUST00000222541 538 ntBASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Chmp5Q9D7S9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Chmp5Q9D7S9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.39■□□□□ 0.7
Chmp5Q9D7S9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Chmp5Q9D7S9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chmp5Q9D7S9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp5Q9D7S9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp5Q9D7S9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp5Q9D7S9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chmp5Q9D7S9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chmp5Q9D7S9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms