Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ShpkQ9D5J6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13□□□□□ -0.33
ShpkQ9D5J6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13□□□□□ -0.33
ShpkQ9D5J6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ShpkQ9D5J6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ShpkQ9D5J6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Gm18115-201ENSMUST00000221209 621 ntBASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ShpkQ9D5J6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms