Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d6Q9D413 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sh2d6Q9D413 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.88□□□□□ -0.35
Sh2d6Q9D413 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sh2d6Q9D413 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sh2d6Q9D413 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 App-207ENSMUST00000227737 2827 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Mir5126-201ENSMUST00000175513 77 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 AV026068-213ENSMUST00000223675 1171 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Prob1-201ENSMUST00000097619 3021 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sh2d6Q9D413 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.85□□□□□ -0.35
Sh2d6Q9D413 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms