Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Raet1eQ9CZQ6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Raet1eQ9CZQ6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Raet1eQ9CZQ6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Raet1eQ9CZQ6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Raet1eQ9CZQ6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Raet1eQ9CZQ6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Raet1eQ9CZQ6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Raet1eQ9CZQ6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Raet1eQ9CZQ6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Raet1eQ9CZQ6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Raet1eQ9CZQ6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms