Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nip7Q9CXK8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Gm7774-201ENSMUST00000200064 533 ntBASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nip7Q9CXK8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm22065-201ENSMUST00000103753 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm22066-201ENSMUST00000103761 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24932-201ENSMUST00000103763 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24115-201ENSMUST00000103799 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm22190-201ENSMUST00000103827 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm22191-201ENSMUST00000103831 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24721-201ENSMUST00000103849 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm28018-201ENSMUST00000103869 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm26399-201ENSMUST00000103937 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm25349-201ENSMUST00000177728 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm23616-201ENSMUST00000177797 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm25871-201ENSMUST00000177816 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24752-201ENSMUST00000178240 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24496-201ENSMUST00000178287 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm25649-201ENSMUST00000178476 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm25548-201ENSMUST00000178681 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm23147-201ENSMUST00000178841 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm26095-201ENSMUST00000179270 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm22171-201ENSMUST00000179283 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm23936-201ENSMUST00000179354 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm22619-201ENSMUST00000179516 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm25255-201ENSMUST00000179579 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24755-201ENSMUST00000179691 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm26506-201ENSMUST00000179692 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm25086-201ENSMUST00000179931 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm23243-201ENSMUST00000180047 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24659-201ENSMUST00000180212 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm24169-201ENSMUST00000180244 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm23689-201ENSMUST00000180354 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm27359-201ENSMUST00000184153 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm27785-201ENSMUST00000184268 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm27466-201ENSMUST00000184396 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm27703-201ENSMUST00000184836 110 ntBASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.24■□□□□ 0.67
Nip7Q9CXK8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Gm12017-201ENSMUST00000122453 1003 ntBASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nip7Q9CXK8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nip7Q9CXK8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nip7Q9CXK8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms