Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Gm13312-201ENSMUST00000119631 718 ntBASIC18.28■□□□□ 0.52
Smc3Q9CW03 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.28■□□□□ 0.52
Smc3Q9CW03 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.28■□□□□ 0.52
Smc3Q9CW03 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.28■□□□□ 0.52
Smc3Q9CW03 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smc3Q9CW03 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc3Q9CW03 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.27■□□□□ 0.52
Smc3Q9CW03 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.27■□□□□ 0.52
Smc3Q9CW03 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.27■□□□□ 0.52
Smc3Q9CW03 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.27■□□□□ 0.52
Smc3Q9CW03 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.27■□□□□ 0.52
Smc3Q9CW03 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.27■□□□□ 0.52
Smc3Q9CW03 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smc3Q9CW03 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smc3Q9CW03 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Gm23634-201ENSMUST00000175071 91 ntBASIC18.26■□□□□ 0.51
Smc3Q9CW03 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smc3Q9CW03 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smc3Q9CW03 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.25■□□□□ 0.51
Smc3Q9CW03 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smc3Q9CW03 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms