Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cldnd1Q9CQX5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Gm11543-201ENSMUST00000120758 370 ntBASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cldnd1Q9CQX5 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Cldnd1Q9CQX5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldnd1Q9CQX5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cldnd1Q9CQX5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Cldnd1Q9CQX5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Gm2810-201ENSMUST00000118681 990 ntBASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Gm18737-201ENSMUST00000173594 937 ntBASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cldnd1Q9CQX5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Gm38225-201ENSMUST00000194001 393 ntBASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Gm7730-201ENSMUST00000212486 454 ntBASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms