Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim11Q99PQ2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim11Q99PQ2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trim11Q99PQ2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim11Q99PQ2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Gm12497-201ENSMUST00000138778 237 ntBASIC17.7■□□□□ 0.42
Trim11Q99PQ2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim11Q99PQ2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim11Q99PQ2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim11Q99PQ2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Gm19164-201ENSMUST00000210667 640 ntBASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms