Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.86■□□□□ 0.77
Rtn4Q99P72 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rtn4Q99P72 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Gm8097-201ENSMUST00000117903 829 ntBASIC19.85■□□□□ 0.77
Rtn4Q99P72 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Gm4535-201ENSMUST00000182274 558 ntBASIC19.85■□□□□ 0.77
Rtn4Q99P72 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Gm10355-201ENSMUST00000097146 517 ntBASIC19.85■□□□□ 0.77
Rtn4Q99P72 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rtn4Q99P72 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Gm1401-201ENSMUST00000122048 772 ntBASIC19.84■□□□□ 0.77
Rtn4Q99P72 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rtn4Q99P72 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rtn4Q99P72 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.83■□□□□ 0.77
Rtn4Q99P72 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rtn4Q99P72 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rtn4Q99P72 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Gm25990-201ENSMUST00000102440 86 ntBASIC19.82■□□□□ 0.76
Rtn4Q99P72 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.82■□□□□ 0.76
Rtn4Q99P72 Gm12350-201ENSMUST00000121208 462 ntBASIC19.82■□□□□ 0.76
Rtn4Q99P72 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Gm5364-201ENSMUST00000216789 889 ntBASIC19.82■□□□□ 0.76
Rtn4Q99P72 CT009495.1-201ENSMUST00000224221 862 ntBASIC19.82■□□□□ 0.76
Rtn4Q99P72 Gm15590-201ENSMUST00000078419 552 ntBASIC19.82■□□□□ 0.76
Rtn4Q99P72 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rtn4Q99P72 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms