Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Mir3081-201ENSMUST00000175305 84 ntBASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp1b1Q99LU0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Gm13312-201ENSMUST00000119631 718 ntBASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp1b1Q99LU0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.68□□□□□ -0.06
Chmp1b1Q99LU0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Gm18669-201ENSMUST00000216049 778 ntBASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Chmp1b1Q99LU0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms