Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clcc1Q99LI2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Gm14822-201ENSMUST00000122247 291 ntBASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clcc1Q99LI2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm6736-201ENSMUST00000166583 948 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm4899-201ENSMUST00000178708 719 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm37153-201ENSMUST00000193637 231 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm43575-201ENSMUST00000196420 516 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Clcc1Q99LI2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Gm15358-201ENSMUST00000119249 520 ntBASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Gm11764-201ENSMUST00000120221 623 ntBASIC15.3■□□□□ 0.04
Clcc1Q99LI2 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Gm25925-201ENSMUST00000158314 306 ntBASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms