Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.79■□□□□ 0.76
Usp16Q99LG0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm8318-201ENSMUST00000182954 872 ntBASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm27300-201ENSMUST00000184085 97 ntBASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm27335-201ENSMUST00000184758 97 ntBASIC19.79■□□□□ 0.76
Usp16Q99LG0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm7787-201ENSMUST00000216858 688 ntBASIC19.79■□□□□ 0.76
Usp16Q99LG0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.79■□□□□ 0.76
Usp16Q99LG0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usp16Q99LG0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Dancr-204ENSMUST00000132389 2347 ntBASIC19.78■□□□□ 0.76
Usp16Q99LG0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Gm11779-201ENSMUST00000118541 368 ntBASIC19.78■□□□□ 0.76
Usp16Q99LG0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.78■□□□□ 0.76
Usp16Q99LG0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.78■□□□□ 0.76
Usp16Q99LG0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp16Q99LG0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.77■□□□□ 0.76
Usp16Q99LG0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.77■□□□□ 0.76
Usp16Q99LG0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Usp16Q99LG0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp16Q99LG0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Usp16Q99LG0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp16Q99LG0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp16Q99LG0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Usp16Q99LG0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usp16Q99LG0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.76■□□□□ 0.75
Usp16Q99LG0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Gm12260-201ENSMUST00000122447 411 ntBASIC19.76■□□□□ 0.75
Usp16Q99LG0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp16Q99LG0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp16Q99LG0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp16Q99LG0 Gm9727-201ENSMUST00000161387 555 ntBASIC19.75■□□□□ 0.75
Usp16Q99LG0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp16Q99LG0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.75■□□□□ 0.75
Usp16Q99LG0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms