Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.69■□□□□ 0.1
Cdk9Q99J95 Gm29707-201ENSMUST00000196325 491 ntBASIC15.69■□□□□ 0.1
Cdk9Q99J95 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Gm9987-201ENSMUST00000069768 567 ntBASIC15.69■□□□□ 0.1
Cdk9Q99J95 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdk9Q99J95 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.68■□□□□ 0.1
Cdk9Q99J95 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdk9Q99J95 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.67■□□□□ 0.1
Cdk9Q99J95 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Gm11336-201ENSMUST00000118168 334 ntBASIC15.67■□□□□ 0.1
Cdk9Q99J95 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.67■□□□□ 0.1
Cdk9Q99J95 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdk9Q99J95 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.66■□□□□ 0.1
Cdk9Q99J95 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdk9Q99J95 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms