Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Thumpd1Q99J36 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Mir5130-201ENSMUST00000175160 84 ntBASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Gm27389-201ENSMUST00000183622 195 ntBASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Gm37722-201ENSMUST00000193757 208 ntBASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Thumpd1Q99J36 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Gm7367-201ENSMUST00000057611 492 ntBASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Gm10812-201ENSMUST00000099864 546 ntBASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Thumpd1Q99J36 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Gm13436-201ENSMUST00000120418 567 ntBASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Thumpd1Q99J36 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms