Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.9■□□□□ 0.46
Smc1bQ920F6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smc1bQ920F6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Smc1bQ920F6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Smc1bQ920F6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.89■□□□□ 0.45
Smc1bQ920F6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.89■□□□□ 0.45
Smc1bQ920F6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.88■□□□□ 0.45
Smc1bQ920F6 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Smc1bQ920F6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.87■□□□□ 0.45
Smc1bQ920F6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.87■□□□□ 0.45
Smc1bQ920F6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Smc1bQ920F6 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.86■□□□□ 0.45
Smc1bQ920F6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.86■□□□□ 0.45
Smc1bQ920F6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.86■□□□□ 0.45
Smc1bQ920F6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Smc1bQ920F6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Smc1bQ920F6 Gm11764-201ENSMUST00000120221 623 ntBASIC17.85■□□□□ 0.45
Smc1bQ920F6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms