Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Mir5131-201ENSMUST00000175426 93 ntBASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb22Q91XZ8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb22Q91XZ8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb22Q91XZ8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb22Q91XZ8 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb22Q91XZ8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb22Q91XZ8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb22Q91XZ8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb22Q91XZ8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb22Q91XZ8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Mir5126-201ENSMUST00000175513 77 ntBASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Gm9682-201ENSMUST00000197505 556 ntBASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb22Q91XZ8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Gm13036-201ENSMUST00000117799 748 ntBASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Gm12350-201ENSMUST00000121208 462 ntBASIC18.05■□□□□ 0.48
Pcdhb22Q91XZ8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms