Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Gm13410-201ENSMUST00000117058 1415 ntBASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhb5Q91XZ5 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Rpph1-201ENSMUST00000175096 319 ntBASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhb5Q91XZ5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm16198-201ENSMUST00000118766 670 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Rprl2-201ENSMUST00000157150 290 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm2272-201ENSMUST00000194903 582 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pcdhb5Q91XZ5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Gm13616-201ENSMUST00000120600 222 ntBASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhb5Q91XZ5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms