Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdhga9Q91XX9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga9Q91XX9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga9Q91XX9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga9Q91XX9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdhga9Q91XX9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Gm12350-201ENSMUST00000121208 462 ntBASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdhga9Q91XX9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdhga9Q91XX9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms