Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.32■□□□□ 0.04
Vsx1Q91V10 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.32■□□□□ 0.04
Vsx1Q91V10 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vsx1Q91V10 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gm18889-201ENSMUST00000174284 929 ntBASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gm20553-201ENSMUST00000204205 844 ntBASIC15.31■□□□□ 0.04
Vsx1Q91V10 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Vsx1Q91V10 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Gm15358-201ENSMUST00000119249 520 ntBASIC15.3■□□□□ 0.04
Vsx1Q91V10 Gm8344-201ENSMUST00000119813 856 ntBASIC15.3■□□□□ 0.04
Vsx1Q91V10 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.3■□□□□ 0.04
Vsx1Q91V10 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Gm43125-201ENSMUST00000201724 730 ntBASIC15.3■□□□□ 0.04
Vsx1Q91V10 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vsx1Q91V10 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vsx1Q91V10 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.29■□□□□ 0.04
Vsx1Q91V10 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.29■□□□□ 0.04
Vsx1Q91V10 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms