Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SfpqQ8VIJ6 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Gm9987-201ENSMUST00000069768 567 ntBASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SfpqQ8VIJ6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SfpqQ8VIJ6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SfpqQ8VIJ6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SfpqQ8VIJ6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.39■□□□□ 0.21
SfpqQ8VIJ6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SfpqQ8VIJ6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SfpqQ8VIJ6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SfpqQ8VIJ6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SfpqQ8VIJ6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SfpqQ8VIJ6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SfpqQ8VIJ6 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SfpqQ8VIJ6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms