Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Gm10566-201ENSMUST00000086739 996 ntBASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rpa1Q8VEE4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rpa1Q8VEE4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Mir5122-201ENSMUST00000175004 89 ntBASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpa1Q8VEE4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.65■□□□□ 0.1
Rpa1Q8VEE4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms