Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Vmn1r28Q8R2C9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.27□□□□□ -0.12
Vmn1r28Q8R2C9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vmn1r28Q8R2C9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vmn1r28Q8R2C9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Gm6550-201ENSMUST00000187574 993 ntBASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 App-207ENSMUST00000227737 2827 ntBASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vmn1r28Q8R2C9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Gm7222-201ENSMUST00000117512 906 ntBASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Gm18733-201ENSMUST00000173950 856 ntBASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Vmn1r28Q8R2C9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Prob1-201ENSMUST00000097619 3021 ntBASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vmn1r28Q8R2C9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms