Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Gm7787-201ENSMUST00000216858 688 ntBASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rpp40Q8R1F9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Rpp40Q8R1F9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpp40Q8R1F9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpp40Q8R1F9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpp40Q8R1F9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpp40Q8R1F9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Rpp40Q8R1F9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rpp40Q8R1F9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rpp40Q8R1F9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms