Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ebf4Q8K4J2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Gm11539-201ENSMUST00000119837 557 ntBASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Gm20049-201ENSMUST00000219950 730 ntBASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ebf4Q8K4J2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ebf4Q8K4J2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Gm29707-201ENSMUST00000196325 491 ntBASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ebf4Q8K4J2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ebf4Q8K4J2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf4Q8K4J2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ebf4Q8K4J2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms