Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm43570-201ENSMUST00000199951 3688 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm43364-201ENSMUST00000196046 3274 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm19721-201ENSMUST00000195284 1764 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm10013-201ENSMUST00000106074 672 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 AC134329.2-201ENSMUST00000217897 428 ntBASIC9.79□□□□□ -0.84
Cystm1Q8K353 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cystm1Q8K353 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Gm16061-201ENSMUST00000122167 857 ntBASIC9.78□□□□□ -0.84
Cystm1Q8K353 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC9.78□□□□□ -0.84
Cystm1Q8K353 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Cystm1Q8K353 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
Cystm1Q8K353 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms