Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Gm6257-201ENSMUST00000163864 910 ntBASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.34■□□□□ 0.53
Rbm28Q8CGC6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.33■□□□□ 0.53
Rbm28Q8CGC6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rbm28Q8CGC6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rbm28Q8CGC6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Gm37153-201ENSMUST00000193637 231 ntBASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rbm28Q8CGC6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rbm28Q8CGC6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms