Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Gm7367-201ENSMUST00000057611 492 ntBASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ccdc28aQ8CEI3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ccdc28aQ8CEI3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ccdc28aQ8CEI3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ccdc28aQ8CEI3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc28aQ8CEI3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms