Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Cabcoco1Q8CDT7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Mir5122-201ENSMUST00000175004 89 ntBASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cabcoco1Q8CDT7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cabcoco1Q8CDT7 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cabcoco1Q8CDT7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cabcoco1Q8CDT7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cabcoco1Q8CDT7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms